Clinical validation

Validation framework

Nanolix is software. Clinical validation is the implementing laboratory's responsibility. We provide documentation, reference datasets, and support for LDT validation workflows.

What LDT-compatible architecture means

And why it matters for hospital labs deploying nanopore sequencing.

Nanolix is software, not an IVD

Nanolix is analytical software — not an FDA-cleared in vitro diagnostic device (IVD). When a CLIA-licensed laboratory deploys Nanolix to generate clinical results, that use is a laboratory-developed test (LDT) under the laboratory's own CLIA certificate.

Under the LDT framework (21 CFR Part 809 and CLIA regulations), the implementing laboratory is responsible for the analytical and clinical validation of the test, not the software vendor. This is the same framework under which hospital laboratories operate their own PCR assays, sequencing workflows, and other laboratory-developed methods.

What this means practically

Your laboratory director is the responsible party for validation. You design and execute the validation study. We provide tools and documentation to make that process as efficient as possible for sequencing-based LDTs.

Our LDT-compatible architecture means: the software generates reproducible, version-locked analytical results with complete audit trails, making your validation study executable and defensible under CLIA quality standards.

CLIA requirements for sequencing LDTs

Under CLIA, laboratories must validate LDTs before clinical use for high-complexity testing. Key validation parameters for a sequencing-based pathogen identification test include:

  • Accuracy — concordance with an established method (culture-based gold standard)
  • Precision — reproducibility across runs, operators, and instrument configurations
  • Analytical sensitivity / LOD — minimum input copies for reliable identification
  • Specificity — cross-reactivity with related organisms or commensal flora
  • Reportable range — analytical measurement range for quantitative outputs
  • Reference interval — where applicable for quantitative parameters

Our validation documentation package provides protocol templates for each of these parameters, pre-configured for a nanopore sequencing-based pathogen identification workflow.

Documentation we provide

Available to qualified laboratory partners under NDA.

Internal Reference Dataset

Panel of clinical isolates tested against culture-based gold standard. Available under NDA to qualified laboratory partners for use in your own validation design. Organism coverage reflects current pathogen library.

Analytical Validation Protocol Template

CLIA-compatible validation study design for your laboratory. Pre-filled with nanopore sequencing-specific parameters, acceptance criteria guidance, and documentation forms for CLIA survey preparation.

Software Version Changelog

Release notes with analytical impact annotations. Identifies which updates affect analytical performance and which are infrastructure changes only — supporting your ongoing verification obligations under CLIA.